WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10B.3.1 Sequence Name  Y39H10B.3.1
Length (nt)  667   Chromosome Location  V: 3670799-3672239
Chromosome . Primary Identifier  V Chromosome Location . Start  3670799
Chromosome Location . End  3672239 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10B.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00194902 Y39H10B.3 Y39H10B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10B.3 Y39H10B.3 447   V: 3670841-3670920

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.3.1 3670799 3672239 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177565   122   V: 3670799-3670920 Caenorhabditis elegans
Exon177567   108   V: 3671071-3671178 Caenorhabditis elegans
Exon177569   36   V: 3671610-3671645 Caenorhabditis elegans
Exon177571   131   V: 3671746-3671876 Caenorhabditis elegans
Exon177573   121   V: 3671921-3672041 Caenorhabditis elegans
Exon177576   149   V: 3672091-3672239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10B.3.1 3670799 3672239 1

1 Sequence

Length
667

1 Sequence Ontology Term

Identifier Name Description
transcript