WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39H10A.1.1 Sequence Name  Y39H10A.1.1
Length (nt)  507   Chromosome Location  V: 3767204-3767808
Chromosome . Primary Identifier  V Chromosome Location . Start  3767204
Chromosome Location . End  3767808 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39H10A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021478 Y39H10A.1 Y39H10A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39H10A.1 Y39H10A.1 396   V: 3767214-3767307

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10A.1.1 3767204 3767808 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177746   104   V: 3767204-3767307 Caenorhabditis elegans
Exon177747   216   V: 3767357-3767572 Caenorhabditis elegans
Exon177748   187   V: 3767622-3767808 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39H10A.1.1 3767204 3767808 1

1 Sequence

Length
507

1 Sequence Ontology Term

Identifier Name Description
transcript