WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08E5.4.1 Sequence Name  R08E5.4.1
Length (nt)  496   Chromosome Location  V: 3768570-3769870
Chromosome . Primary Identifier  V Chromosome Location . Start  3768570
Chromosome Location . End  3769870 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E5.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019964 R08E5.4 R08E5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08E5.4 R08E5.4 387   V: 3768585-3768672

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08E5.4.1 3768570 3769870 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177749   103   V: 3768570-3768672 Caenorhabditis elegans
Exon177750   216   V: 3769423-3769638 Caenorhabditis elegans
Exon177751   177   V: 3769694-3769870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08E5.4.1 3768570 3769870 1

1 Sequence

Length
496

1 Sequence Ontology Term

Identifier Name Description
transcript