WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R08F11.1a Sequence Name  R08F11.1a
Length (nt)  2460   Chromosome Location  V: 3777828-3778013
Chromosome . Primary Identifier  V Chromosome Location . Start  3777828
Chromosome Location . End  3778013
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08F11.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51625 R08F11.1, isoform a 94.5 819 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051556
WBRNAi00017596

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R08F11.1a 3777828 3778013 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019965 R08F11.1 R08F11.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:R08F11.1a 3777828 3778013 -1
CDS:R08F11.1a 3779128 3779218 -1
CDS:R08F11.1a 3779273 3779611 -1
CDS:R08F11.1a 3780030 3780102 -1
CDS:R08F11.1a 3780148 3780348 -1
CDS:R08F11.1a 3780563 3780670 -1
CDS:R08F11.1a 3781221 3781325 -1
CDS:R08F11.1a 3781373 3781674 -1
CDS:R08F11.1a 3781723 3781876 -1
CDS:R08F11.1a 3781929 3782116 -1
CDS:R08F11.1a 3782459 3782942 -1
CDS:R08F11.1a 3783356 3783444 -1
CDS:R08F11.1a 3784074 3784213 -1

1 Sequence

Length
2460

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R08F11.1a.1 R08F11.1a.1 2995   V: 3777297-3784217