WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08F11.1b.1 Sequence Name  R08F11.1b.1
Length (nt)  990   Chromosome Location  V: 3777828-3780662
Chromosome . Primary Identifier  V Chromosome Location . Start  3777828
Chromosome Location . End  3780662 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08F11.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019965 R08F11.1 R08F11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08F11.1b R08F11.1b 990   V: 3777828-3778013

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.1b.1 3777828 3780662 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177839   186   V: 3777828-3778013 Caenorhabditis elegans
Exon177841   91   V: 3779128-3779218 Caenorhabditis elegans
Exon177843   339   V: 3779273-3779611 Caenorhabditis elegans
Exon177845   73   V: 3780030-3780102 Caenorhabditis elegans
Exon177847   201   V: 3780148-3780348 Caenorhabditis elegans
Exon177848   100   V: 3780563-3780662 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.1b.1 3777828 3780662 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
transcript