WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H10D18.5c.1 Sequence Name  H10D18.5c.1
Length (nt)  1393   Chromosome Location  V: 3813735-3820534
Chromosome . Primary Identifier  V Chromosome Location . Start  3813735
Chromosome Location . End  3820534 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H10D18.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019180 H10D18.5 H10D18.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H10D18.5c H10D18.5c 1056   V: 3814028-3814297

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H10D18.5c.1 3813735 3820534 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177843   563   V: 3813735-3814297 Caenorhabditis elegans
Exon177852   148   V: 3816633-3816780 Caenorhabditis elegans
Exon177856   235   V: 3817366-3817600 Caenorhabditis elegans
Exon177860   114   V: 3818516-3818629 Caenorhabditis elegans
Exon177864   110   V: 3818745-3818854 Caenorhabditis elegans
Exon177869   101   V: 3820094-3820194 Caenorhabditis elegans
Exon177870   122   V: 3820413-3820534 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H10D18.5c.1 3813735 3820534 -1

1 Sequence

Length
1393

1 Sequence Ontology Term

Identifier Name Description
transcript