WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08F11.3.1 Sequence Name  R08F11.3.1
Length (nt)  1667   Chromosome Location  V: 3800782-3803542
Chromosome . Primary Identifier  V Chromosome Location . Start  3800782
Chromosome Location . End  3803542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08F11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019967 cyp-33C8 R08F11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08F11.3 R08F11.3 1485   V: 3800866-3801135

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.3.1 3800782 3803542 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177872   354   V: 3800782-3801135 Caenorhabditis elegans
Exon177873   511   V: 3801895-3802405 Caenorhabditis elegans
Exon177874   499   V: 3802451-3802949 Caenorhabditis elegans
Exon177875   303   V: 3803240-3803542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08F11.3.1 3800782 3803542 -1

1 Sequence

Length
1667

1 Sequence Ontology Term

Identifier Name Description
transcript