WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H10D18.5a.1 Sequence Name  H10D18.5a.1
Length (nt)  1378   Chromosome Location  V: 3813736-3831716
Chromosome . Primary Identifier  V Chromosome Location . Start  3813736
Chromosome Location . End  3831716 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H10D18.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019180 H10D18.5 H10D18.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H10D18.5a H10D18.5a 1029   V: 3814028-3814297

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H10D18.5a.1 3813736 3831716 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177899   562   V: 3813736-3814297 Caenorhabditis elegans
Exon177905   148   V: 3816633-3816780 Caenorhabditis elegans
Exon177909   235   V: 3817366-3817600 Caenorhabditis elegans
Exon177913   114   V: 3818516-3818629 Caenorhabditis elegans
Exon177917   110   V: 3818745-3818854 Caenorhabditis elegans
Exon177922   101   V: 3820094-3820194 Caenorhabditis elegans
Exon177927   108   V: 3831609-3831716 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H10D18.5a.1 3813736 3831716 -1

1 Sequence

Length
1378

1 Sequence Ontology Term

Identifier Name Description
transcript