WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17E7.6.2 Sequence Name  C17E7.6.2
Length (nt)  1303   Chromosome Location  V: 3871174-3874152
Chromosome . Primary Identifier  V Chromosome Location . Start  3871174
Chromosome Location . End  3874152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17E7.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015901 nhr-158 C17E7.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17E7.6 C17E7.6 1080   V: 3871303-3871553

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17E7.6.2 3871174 3874152 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon177937   380   V: 3871174-3871553 Caenorhabditis elegans
Exon177940   262   V: 3871632-3871893 Caenorhabditis elegans
Exon177942   111   V: 3871956-3872066 Caenorhabditis elegans
Exon177944   484   V: 3872733-3873216 Caenorhabditis elegans
Exon177945   66   V: 3874087-3874152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17E7.6.2 3871174 3874152 -1

1 Sequence

Length
1303

1 Sequence Ontology Term

Identifier Name Description
transcript