WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17E7.1.1 Sequence Name  C17E7.1.1
Length (nt)  1285   Chromosome Location  V: 3906106-3908452
Chromosome . Primary Identifier  V Chromosome Location . Start  3906106
Chromosome Location . End  3908452 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17E7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015897 nhr-156 C17E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17E7.1 C17E7.1 1179   V: 3906141-3906256

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17E7.1.1 3906106 3908452 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178024   151   V: 3906106-3906256 Caenorhabditis elegans
Exon178025   63   V: 3906313-3906375 Caenorhabditis elegans
Exon178026   59   V: 3906430-3906488 Caenorhabditis elegans
Exon178027   374   V: 3906532-3906905 Caenorhabditis elegans
Exon178028   194   V: 3907712-3907905 Caenorhabditis elegans
Exon178029   268   V: 3907959-3908226 Caenorhabditis elegans
Exon178030   176   V: 3908277-3908452 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17E7.1.1 3906106 3908452 1

1 Sequence

Length
1285

1 Sequence Ontology Term

Identifier Name Description
transcript