WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09D9.8.1 Sequence Name  K09D9.8.1
Length (nt)  1104   Chromosome Location  V: 4005519-4007565
Chromosome . Primary Identifier  V Chromosome Location . Start  4005519
Chromosome Location . End  4007565 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09D9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005234 srh-8 K09D9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09D9.8 K09D9.8 1008   V: 4005567-4005736

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09D9.8.1 4005519 4007565 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178256   218   V: 4005519-4005736 Caenorhabditis elegans
Exon178257   340   V: 4006521-4006860 Caenorhabditis elegans
Exon178258   234   V: 4006919-4007152 Caenorhabditis elegans
Exon178259   79   V: 4007207-4007285 Caenorhabditis elegans
Exon178260   233   V: 4007333-4007565 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09D9.8.1 4005519 4007565 1

1 Sequence

Length
1104

1 Sequence Ontology Term

Identifier Name Description
transcript