WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C49G7.12a.1 Sequence Name  C49G7.12a.1
Length (nt)  1353   Chromosome Location  V: 4038410-4039940
Chromosome . Primary Identifier  V Chromosome Location . Start  4038410
Chromosome Location . End  4039940 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C49G7.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00077593 C49G7.12 C49G7.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C49G7.12a C49G7.12a 864   V: 4038828-4038853

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C49G7.12a.1 4038410 4039940 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178326   444   V: 4038410-4038853 Caenorhabditis elegans
Exon178327   302   V: 4038935-4039236 Caenorhabditis elegans
Exon178329   433   V: 4039286-4039718 Caenorhabditis elegans
Exon178332   174   V: 4039767-4039940 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C49G7.12a.1 4038410 4039940 1

1 Sequence

Length
1353

1 Sequence Ontology Term

Identifier Name Description
transcript