WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.12.2 Sequence Name  T05B4.12.2
Length (nt)  1239   Chromosome Location  V: 4123173-4125259
Chromosome . Primary Identifier  V Chromosome Location . Start  4123173
Chromosome Location . End  4125259 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020243 T05B4.12 T05B4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.12 T05B4.12 735   V: 4123329-4123717

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.12.2 4123173 4125259 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178475   545   V: 4123173-4123717 Caenorhabditis elegans
Exon178477   256   V: 4123773-4124028 Caenorhabditis elegans
Exon178479   92   V: 4124773-4124864 Caenorhabditis elegans
Exon178481   346   V: 4124914-4125259 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.12.2 4123173 4125259 -1

1 Sequence

Length
1239

1 Sequence Ontology Term

Identifier Name Description
transcript