WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.8.1 Sequence Name  T05B4.8.1
Length (nt)  878   Chromosome Location  V: 4115089-4116171
Chromosome . Primary Identifier  V Chromosome Location . Start  4115089
Chromosome Location . End  4116171 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020239 T05B4.8 T05B4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.8 T05B4.8 753   V: 4115192-4115583

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.8.1 4115089 4116171 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178515   495   V: 4115089-4115583 Caenorhabditis elegans
Exon178517   259   V: 4115636-4115894 Caenorhabditis elegans
Exon178518   124   V: 4116048-4116171 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.8.1 4115089 4116171 -1

1 Sequence

Length
878

1 Sequence Ontology Term

Identifier Name Description
transcript