WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.3.1 Sequence Name  T05B4.3.1
Length (nt)  893   Chromosome Location  V: 4129904-4130909
Chromosome . Primary Identifier  V Chromosome Location . Start  4129904
Chromosome Location . End  4130909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020237 phat-4 T05B4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.3 T05B4.3 747   V: 4129938-4130027

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.3.1 4129904 4130909 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178490   124   V: 4129904-4130027 Caenorhabditis elegans
Exon178491   262   V: 4130087-4130348 Caenorhabditis elegans
Exon178492   507   V: 4130403-4130909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.3.1 4129904 4130909 1

1 Sequence

Length
893

1 Sequence Ontology Term

Identifier Name Description
transcript