WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05B4.11.1 Sequence Name  T05B4.11.1
Length (nt)  915   Chromosome Location  V: 4121489-4122515
Chromosome . Primary Identifier  V Chromosome Location . Start  4121489
Chromosome Location . End  4122515 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05B4.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020242 phat-5 T05B4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05B4.11 T05B4.11 750   V: 4121608-4121996

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.11.1 4121489 4122515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178526   508   V: 4121489-4121996 Caenorhabditis elegans
Exon178527   259   V: 4122051-4122309 Caenorhabditis elegans
Exon178528   148   V: 4122368-4122515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05B4.11.1 4121489 4122515 -1

1 Sequence

Length
915

1 Sequence Ontology Term

Identifier Name Description
transcript