WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G5AM.9a.1 Sequence Name  Y45G5AM.9a.1
Length (nt)  1758   Chromosome Location  V: 4181333-4191515
Chromosome . Primary Identifier  V Chromosome Location . Start  4181333
Chromosome Location . End  4191515 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G5AM.9a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021561 Y45G5AM.9 Y45G5AM.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G5AM.9a Y45G5AM.9a 1500   V: 4181584-4181764

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9a.1 4181333 4191515 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178649   432   V: 4181333-4181764 Caenorhabditis elegans
Exon178652   136   V: 4182289-4182424 Caenorhabditis elegans
Exon178658   250   V: 4183429-4183678 Caenorhabditis elegans
Exon178661   576   V: 4184500-4185075 Caenorhabditis elegans
Exon178689   132   V: 4190016-4190147 Caenorhabditis elegans
Exon178692   232   V: 4191284-4191515 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9a.1 4181333 4191515 -1

1 Sequence

Length
1758

1 Sequence Ontology Term

Identifier Name Description
transcript