WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G5AM.9c.1 Sequence Name  Y45G5AM.9c.1
Length (nt)  1113   Chromosome Location  V: 4181584-4185045
Chromosome . Primary Identifier  V Chromosome Location . Start  4181584
Chromosome Location . End  4185045 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G5AM.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021561 Y45G5AM.9 Y45G5AM.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G5AM.9c Y45G5AM.9c 1113   V: 4181584-4181764

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9c.1 4181584 4185045 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178651   181   V: 4181584-4181764 Caenorhabditis elegans
Exon178653   136   V: 4182289-4182424 Caenorhabditis elegans
Exon178659   250   V: 4183429-4183678 Caenorhabditis elegans
Exon178660   546   V: 4184500-4185045 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9c.1 4181584 4185045 -1

1 Sequence

Length
1113

1 Sequence Ontology Term

Identifier Name Description
transcript