WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y45G5AM.9b.1 Sequence Name  Y45G5AM.9b.1
Length (nt)  1346   Chromosome Location  V: 4183340-4194637
Chromosome . Primary Identifier  V Chromosome Location . Start  4183340
Chromosome Location . End  4194637 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y45G5AM.9b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021561 Y45G5AM.9 Y45G5AM.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y45G5AM.9b Y45G5AM.9b 1272   V: 4183340-4183678

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9b.1 4183340 4194637 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178656   339   V: 4183340-4183678 Caenorhabditis elegans
Exon178662   576   V: 4184500-4185075 Caenorhabditis elegans
Exon178690   132   V: 4190016-4190147 Caenorhabditis elegans
Exon178693   232   V: 4191284-4191515 Caenorhabditis elegans
Exon178695   67   V: 4194571-4194637 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y45G5AM.9b.1 4183340 4194637 -1

1 Sequence

Length
1346

1 Sequence Ontology Term

Identifier Name Description
transcript