WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H43I07.3a Sequence Name  H43I07.3a
Length (nt)  1020   Chromosome Location  V: 4195616-4195710
Chromosome . Primary Identifier  V Chromosome Location . Start  4195616
Chromosome Location . End  4195710
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43I07.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30081 ALGN-5, isoform a 38.7 339 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00049564
WBRNAi00115266

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H43I07.3a 4195616 4195710 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019276 algn-5 H43I07.3 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:H43I07.3a 4195616 4195710 1
CDS:H43I07.3a 4195761 4195944 1
CDS:H43I07.3a 4196011 4196203 1
CDS:H43I07.3a 4197021 4197192 1
CDS:H43I07.3a 4197242 4197395 1
CDS:H43I07.3a 4198225 4198413 1
CDS:H43I07.3a 4199060 4199092 1

1 Sequence

Length
1020

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H43I07.3a.1 H43I07.3a.1 1366   V: 4195577-4199399