WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H43I07.3b Sequence Name  H43I07.3b
Length (nt)  534   Chromosome Location  V: 4197035-4197192
Chromosome . Primary Identifier  V Chromosome Location . Start  4197035
Chromosome Location . End  4197192
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43I07.3b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51596 ALGN-5, isoform b 20.3 177 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00115266

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H43I07.3b 4197035 4197192 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019276 algn-5 H43I07.3 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:H43I07.3b 4197035 4197192 1
CDS:H43I07.3b 4197242 4197395 1
CDS:H43I07.3b 4198225 4198413 1
CDS:H43I07.3b 4199060 4199092 1

1 Sequence

Length
534

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H43I07.3b.1 H43I07.3b.1 534   V: 4197035-4199092