WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H43I07.1a.1 Sequence Name  H43I07.1a.1
Length (nt)  1469   Chromosome Location  V: 4204721-4208965
Chromosome . Primary Identifier  V Chromosome Location . Start  4204721
Chromosome Location . End  4208965 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H43I07.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019274 H43I07.1 H43I07.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H43I07.1a H43I07.1a 828   V: 4204763-4204895

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H43I07.1a.1 4204721 4208965 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178713   175   V: 4204721-4204895 Caenorhabditis elegans
Exon178716   239   V: 4205472-4205710 Caenorhabditis elegans
Exon178719   253   V: 4206491-4206743 Caenorhabditis elegans
Exon178722   802   V: 4208164-4208965 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H43I07.1a.1 4204721 4208965 1

1 Sequence

Length
1469

1 Sequence Ontology Term

Identifier Name Description
transcript