WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:E03D2.2a Sequence Name  E03D2.2a
Length (nt)  390   Chromosome Location  V: 4219667-4219721
Chromosome . Primary Identifier  V Chromosome Location . Start  4219667
Chromosome Location . End  4219721
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E03D2.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16959 NLP-9, isoform a 14.8 129 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002271
WBRNAi00043631
WBRNAi00030482

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:E03D2.2a 4219667 4219721 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003747 nlp-9 E03D2.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:E03D2.2a 4219667 4219721 1
CDS:E03D2.2a 4220366 4220426 1
CDS:E03D2.2a 4220475 4220627 1
CDS:E03D2.2a 4220678 4220737 1
CDS:E03D2.2a 4221839 4221899 1

1 Sequence

Length
390

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E03D2.2a.1 E03D2.2a.1 712   V: 4219643-4222197