WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D2.3.1 Sequence Name  F47D2.3.1
Length (nt)  1068   Chromosome Location  V: 4257957-4260190
Chromosome . Primary Identifier  V Chromosome Location . Start  4257957
Chromosome Location . End  4260190 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018554 srt-3 F47D2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D2.3 F47D2.3 1068   V: 4257957-4258301

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.3.1 4257957 4260190 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178762   345   V: 4257957-4258301 Caenorhabditis elegans
Exon178763   147   V: 4258838-4258984 Caenorhabditis elegans
Exon178764   423   V: 4259030-4259452 Caenorhabditis elegans
Exon178765   153   V: 4260038-4260190 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.3.1 4257957 4260190 -1

1 Sequence

Length
1068

1 Sequence Ontology Term

Identifier Name Description
transcript