WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47D2.6 Sequence Name  F47D2.6
Length (nt)  984   Chromosome Location  V: 4269486-4269755
Chromosome . Primary Identifier  V Chromosome Location . Start  4269486
Chromosome Location . End  4269755
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D2.6

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10696 SRT-38 37.0 327 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00047661
WBRNAi00015194

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47D2.6 4269486 4269755 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018557 srt-38 F47D2.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47D2.6 4269486 4269755 -1
CDS:F47D2.6 4270071 4270637 -1
CDS:F47D2.6 4270684 4270774 -1
CDS:F47D2.6 4271303 4271358 -1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47D2.6.1 F47D2.6.1 1015   V: 4269455-4271358