WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D2.8.1 Sequence Name  F47D2.8.1
Length (nt)  984   Chromosome Location  V: 4279848-4281799
Chromosome . Primary Identifier  V Chromosome Location . Start  4279848
Chromosome Location . End  4281799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D2.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018559 srt-37 F47D2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D2.8 F47D2.8 984   V: 4279848-4280117

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.8.1 4279848 4281799 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178790   270   V: 4279848-4280117 Caenorhabditis elegans
Exon178791   567   V: 4280540-4281106 Caenorhabditis elegans
Exon178792   91   V: 4281153-4281243 Caenorhabditis elegans
Exon178793   56   V: 4281744-4281799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.8.1 4279848 4281799 -1

1 Sequence

Length
984

1 Sequence Ontology Term

Identifier Name Description
transcript