WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F47D2.11.1 Sequence Name  F47D2.11.1
Length (nt)  897   Chromosome Location  V: 4294156-4296020
Chromosome . Primary Identifier  V Chromosome Location . Start  4294156
Chromosome Location . End  4296020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47D2.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00206392 F47D2.11 F47D2.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47D2.11 F47D2.11 897   V: 4294156-4294281

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.11.1 4294156 4296020 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon178869   126   V: 4294156-4294281 Caenorhabditis elegans
Exon178870   54   V: 4294330-4294383 Caenorhabditis elegans
Exon178871   421   V: 4294436-4294856 Caenorhabditis elegans
Exon178872   107   V: 4295672-4295778 Caenorhabditis elegans
Exon178873   189   V: 4295832-4296020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F47D2.11.1 4294156 4296020 -1

1 Sequence

Length
897

1 Sequence Ontology Term

Identifier Name Description
transcript