WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00201536 Gene Name  F13A2.13
Sequence Name  ? F13A2.13 Organism  Caenorhabditis elegans
Automated Description  Is affected by adr-2 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 54
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00201536

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F13A2.13 F13A2.13 54   V: 4386609-4386662
 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk963301
gk963591
gk963553
gk964259
gk964351
gk963850
gk964431
tm10849
gk963723
gk963724
WBVar02004888

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00201536 4386609 4386662 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_4386663..4386807   145 V: 4386663-4386807 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in adr-2(ok735) and adr-2(gv42) comparing to in N2 at L4 larva stage. DESeq FDR <= 0.05 WBPaper00056617:adr-2_upregulated_L4_transcript

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00201536 4386609 4386662 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
54

1 Sequence Ontology Term