WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13A2.5b.1 Sequence Name  F13A2.5b.1
Length (nt)  554   Chromosome Location  V: 4401202-4401957
Chromosome . Primary Identifier  V Chromosome Location . Start  4401202
Chromosome Location . End  4401957 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13A2.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017414 F13A2.5 F13A2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13A2.5b F13A2.5b 441   V: 4401298-4401365

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13A2.5b.1 4401202 4401957 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179076   164   V: 4401202-4401365 Caenorhabditis elegans
Exon179078   135   V: 4401413-4401547 Caenorhabditis elegans
Exon179080   114   V: 4401601-4401714 Caenorhabditis elegans
Exon179081   85   V: 4401769-4401853 Caenorhabditis elegans
Exon179083   56   V: 4401902-4401957 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13A2.5b.1 4401202 4401957 -1

1 Sequence

Length
554

1 Sequence Ontology Term

Identifier Name Description
transcript