WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D7A.11.1 Sequence Name  Y47D7A.11.1
Length (nt)  464   Chromosome Location  V: 4427769-4428302
Chromosome . Primary Identifier  V Chromosome Location . Start  4427769
Chromosome Location . End  4428302 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D7A.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021623 Y47D7A.11 Y47D7A.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D7A.11 Y47D7A.11 390   V: 4427827-4427921

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D7A.11.1 4427769 4428302 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179069   153   V: 4427769-4427921 Caenorhabditis elegans
Exon179070   311   V: 4427992-4428302 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D7A.11.1 4427769 4428302 -1

1 Sequence

Length
464

1 Sequence Ontology Term

Identifier Name Description
transcript