WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y47D7A.14d.1 Sequence Name  Y47D7A.14d.1
Length (nt)  567   Chromosome Location  V: 4443523-4446206
Chromosome . Primary Identifier  V Chromosome Location . Start  4443523
Chromosome Location . End  4446206 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y47D7A.14d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021626 rft-2 Y47D7A.14 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47D7A.14d Y47D7A.14d 567   V: 4443523-4443615

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y47D7A.14d.1 4443523 4446206 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179095   93   V: 4443523-4443615 Caenorhabditis elegans
Exon179100   120   V: 4444205-4444324 Caenorhabditis elegans
Exon179106   204   V: 4444375-4444578 Caenorhabditis elegans
Exon179107   150   V: 4446057-4446206 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y47D7A.14d.1 4443523 4446206 -1

1 Sequence

Length
567

1 Sequence Ontology Term

Identifier Name Description
transcript