WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T08H10.2.1 Sequence Name  T08H10.2.1
Length (nt)  1029   Chromosome Location  V: 4474843-4476996
Chromosome . Primary Identifier  V Chromosome Location . Start  4474843
Chromosome Location . End  4476996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T08H10.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006101 str-35 T08H10.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T08H10.2 T08H10.2 1029   V: 4474843-4475201

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T08H10.2.1 4474843 4476996 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179126   359   V: 4474843-4475201 Caenorhabditis elegans
Exon179127   138   V: 4475255-4475392 Caenorhabditis elegans
Exon179128   67   V: 4476305-4476371 Caenorhabditis elegans
Exon179129   81   V: 4476423-4476503 Caenorhabditis elegans
Exon179130   307   V: 4476561-4476867 Caenorhabditis elegans
Exon179131   77   V: 4476920-4476996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T08H10.2.1 4474843 4476996 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
transcript