WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2b.1 Sequence Name  T28F12.2b.1
Length (nt)  2606   Chromosome Location  V: 4499330-4511447
Chromosome . Primary Identifier  V Chromosome Location . Start  4499330
Chromosome Location . End  4511447 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2b T28F12.2b 1584   V: 4499796-4499807

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2b.1 4499330 4511447 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179149   478   V: 4499330-4499807 Caenorhabditis elegans
Exon179155   182   V: 4501219-4501400 Caenorhabditis elegans
Exon179167   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179181   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179195   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179212   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179234   158   V: 4505359-4505516 Caenorhabditis elegans
Exon179242   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179258   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179287   656   V: 4510792-4511447 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2b.1 4499330 4511447 1

1 Sequence

Length
2606

1 Sequence Ontology Term

Identifier Name Description
transcript