WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2d.4 Sequence Name  T28F12.2d.4
Length (nt)  2447   Chromosome Location  V: 4499476-4511446
Chromosome . Primary Identifier  V Chromosome Location . Start  4499476
Chromosome Location . End  4511446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2d.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2d T28F12.2d 336   V: 4509913-4510148

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.4 4499476 4511446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179150   332   V: 4499476-4499807 Caenorhabditis elegans
Exon179161   182   V: 4501219-4501400 Caenorhabditis elegans
Exon179173   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179187   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179201   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179216   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179226   146   V: 4504975-4505120 Caenorhabditis elegans
Exon179246   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179264   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179284   655   V: 4510792-4511446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2d.4 4499476 4511446 1

1 Sequence

Length
2447

1 Sequence Ontology Term

Identifier Name Description
transcript