WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2a.1 Sequence Name  T28F12.2a.1
Length (nt)  1925   Chromosome Location  V: 4497463-4511117
Chromosome . Primary Identifier  V Chromosome Location . Start  4497463
Chromosome Location . End  4511117 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2a T28F12.2a 1695   V: 4497467-4497589

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2a.1 4497463 4511117 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179200   127   V: 4497463-4497589 Caenorhabditis elegans
Exon179209   182   V: 4501219-4501400 Caenorhabditis elegans
Exon179221   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179235   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179249   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179266   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179288   158   V: 4505359-4505516 Caenorhabditis elegans
Exon179296   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179312   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179333   326   V: 4510792-4511117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2a.1 4497463 4511117 1

1 Sequence

Length
1925

1 Sequence Ontology Term

Identifier Name Description
transcript