WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T28F12.2h.1 Sequence Name  T28F12.2h.1
Length (nt)  1461   Chromosome Location  V: 4501318-4510891
Chromosome . Primary Identifier  V Chromosome Location . Start  4501318
Chromosome Location . End  4510891 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T28F12.2h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006796 unc-62 T28F12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.2h T28F12.2h 1461   V: 4501318-4501400

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2h.1 4501318 4510891 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179220   83   V: 4501318-4501400 Caenorhabditis elegans
Exon179233   151   V: 4501719-4501869 Caenorhabditis elegans
Exon179247   108   V: 4501917-4502024 Caenorhabditis elegans
Exon179262   258   V: 4502583-4502840 Caenorhabditis elegans
Exon179278   268   V: 4503963-4504230 Caenorhabditis elegans
Exon179286   146   V: 4504975-4505120 Caenorhabditis elegans
Exon179310   77   V: 4505829-4505905 Caenorhabditis elegans
Exon179328   270   V: 4509879-4510148 Caenorhabditis elegans
Exon179332   100   V: 4510792-4510891 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T28F12.2h.1 4501318 4510891 1

1 Sequence

Length
1461

1 Sequence Ontology Term

Identifier Name Description
transcript