WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y61A9LA.4.1 Sequence Name  Y61A9LA.4.1
Length (nt)  841   Chromosome Location  V: 4560741-4561823
Chromosome . Primary Identifier  V Chromosome Location . Start  4560741
Chromosome Location . End  4561823 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y61A9LA.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022016 Y61A9LA.4 Y61A9LA.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y61A9LA.4 Y61A9LA.4 600   V: 4560842-4560973

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y61A9LA.4.1 4560741 4561823 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179354   233   V: 4560741-4560973 Caenorhabditis elegans
Exon179355   112   V: 4561018-4561129 Caenorhabditis elegans
Exon179356   73   V: 4561181-4561253 Caenorhabditis elegans
Exon179357   105   V: 4561304-4561408 Caenorhabditis elegans
Exon179358   157   V: 4561456-4561612 Caenorhabditis elegans
Exon179359   161   V: 4561663-4561823 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y61A9LA.4.1 4560741 4561823 1

1 Sequence

Length
841

1 Sequence Ontology Term

Identifier Name Description
transcript