WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y61A9LA.8a.1 Sequence Name  Y61A9LA.8a.1
Length (nt)  2831   Chromosome Location  V: 4562058-4570043
Chromosome . Primary Identifier  V Chromosome Location . Start  4562058
Chromosome Location . End  4570043 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y61A9LA.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022019 sut-2 Y61A9LA.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y61A9LA.8a Y61A9LA.8a 2223   V: 4562650-4562799

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y61A9LA.8a.1 4562058 4570043 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179361   742   V: 4562058-4562799 Caenorhabditis elegans
Exon179362   82   V: 4562855-4562936 Caenorhabditis elegans
Exon179364   414   V: 4564367-4564780 Caenorhabditis elegans
Exon179366   92   V: 4566202-4566293 Caenorhabditis elegans
Exon179368   781   V: 4566524-4567304 Caenorhabditis elegans
Exon179370   231   V: 4568299-4568529 Caenorhabditis elegans
Exon179372   105   V: 4569435-4569539 Caenorhabditis elegans
Exon179374   317   V: 4569599-4569915 Caenorhabditis elegans
Exon179376   67   V: 4569977-4570043 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y61A9LA.8a.1 4562058 4570043 -1

1 Sequence

Length
2831

1 Sequence Ontology Term

Identifier Name Description
transcript