WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D11.1 Sequence Name  F54D11.1
Length (nt)  1314   Chromosome Location  V: 4628768-4628874
Chromosome . Primary Identifier  V Chromosome Location . Start  4628768
Chromosome Location . End  4628874
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D11.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE11068 PMT-2 49.8 437 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00048294
WBRNAi00117407
WBRNAi00084627
WBRNAi00084628
WBRNAi00084629
WBRNAi00084630
WBRNAi00112534
WBRNAi00117409
WBRNAi00117411
WBRNAi00117405

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D11.1 4628768 4628874 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018811 pmt-2 F54D11.1 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D11.1 4628768 4628874 1
CDS:F54D11.1 4630166 4630286 1
CDS:F54D11.1 4631364 4631457 1
CDS:F54D11.1 4631582 4632204 1
CDS:F54D11.1 4634766 4635014 1
CDS:F54D11.1 4635072 4635191 1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D11.1.1 F54D11.1.1 1574   V: 4628580-4635263