WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D11.2 Sequence Name  F54D11.2
Length (nt)  3438   Chromosome Location  V: 4617947-4618005
Chromosome . Primary Identifier  V Chromosome Location . Start  4617947
Chromosome Location . End  4618005
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D11.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30805 SUMV-2 126.0 1145 Caenorhabditis elegans
 

Other

19 RNAi

WormBase ID
WBRNAi00007394
WBRNAi00048295
WBRNAi00085983
WBRNAi00015607
WBRNAi00081798
WBRNAi00081831
WBRNAi00081861
WBRNAi00081874
WBRNAi00032781
WBRNAi00061827
WBRNAi00064335
WBRNAi00085972
WBRNAi00085974
WBRNAi00085973
WBRNAi00085976
WBRNAi00085975
WBRNAi00081882
WBRNAi00081899
WBRNAi00081912

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D11.2 4617947 4618005 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018812 sumv-2 F54D11.2 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D11.2 4617947 4618005 1
CDS:F54D11.2 4618875 4619652 1
CDS:F54D11.2 4620521 4620822 1
CDS:F54D11.2 4622060 4623017 1
CDS:F54D11.2 4623994 4624515 1
CDS:F54D11.2 4625516 4625991 1
CDS:F54D11.2 4627238 4627580 1

1 Sequence

Length
3438

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D11.2.2 F54D11.2.2 4493   V: 4617560-4628539
Transcript:F54D11.2.1 F54D11.2.1 4406   V: 4617938-4628539