WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K03B4.5.1 Sequence Name  K03B4.5.1
Length (nt)  942   Chromosome Location  V: 4666745-4668736
Chromosome . Primary Identifier  V Chromosome Location . Start  4666745
Chromosome Location . End  4668736 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K03B4.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005968 srx-77 K03B4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K03B4.5 K03B4.5 942   V: 4666745-4666868

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K03B4.5.1 4666745 4668736 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179535   124   V: 4666745-4666868 Caenorhabditis elegans
Exon179536   75   V: 4667451-4667525 Caenorhabditis elegans
Exon179537   274   V: 4667573-4667846 Caenorhabditis elegans
Exon179538   233   V: 4668035-4668267 Caenorhabditis elegans
Exon179539   161   V: 4668458-4668618 Caenorhabditis elegans
Exon179540   75   V: 4668662-4668736 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K03B4.5.1 4666745 4668736 -1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
transcript