WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39G3.6.1 Sequence Name  F39G3.6.1
Length (nt)  2217   Chromosome Location  V: 4710764-4715011
Chromosome . Primary Identifier  V Chromosome Location . Start  4710764
Chromosome Location . End  4715011 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39G3.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018211 oac-24 F39G3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39G3.6 F39G3.6 1953   V: 4710928-4711031

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.6.1 4710764 4715011 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179592   268   V: 4710764-4711031 Caenorhabditis elegans
Exon179593   93   V: 4711187-4711279 Caenorhabditis elegans
Exon179594   172   V: 4711330-4711501 Caenorhabditis elegans
Exon179595   492   V: 4712178-4712669 Caenorhabditis elegans
Exon179596   121   V: 4713069-4713189 Caenorhabditis elegans
Exon179597   302   V: 4713239-4713540 Caenorhabditis elegans
Exon179598   121   V: 4713591-4713711 Caenorhabditis elegans
Exon179599   106   V: 4713981-4714086 Caenorhabditis elegans
Exon179600   84   V: 4714133-4714216 Caenorhabditis elegans
Exon179601   190   V: 4714263-4714452 Caenorhabditis elegans
Exon179602   268   V: 4714744-4715011 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.6.1 4710764 4715011 1

1 Sequence

Length
2217

1 Sequence Ontology Term

Identifier Name Description
transcript