WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F39G3.3.1 Sequence Name  F39G3.3.1
Length (nt)  2438   Chromosome Location  V: 4731911-4734723
Chromosome . Primary Identifier  V Chromosome Location . Start  4731911
Chromosome Location . End  4734723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39G3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018208 F39G3.3 F39G3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F39G3.3 F39G3.3 2145   V: 4731911-4732186

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.3.1 4731911 4734723 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179633   276   V: 4731911-4732186 Caenorhabditis elegans
Exon179634   113   V: 4732236-4732348 Caenorhabditis elegans
Exon179635   836   V: 4732399-4733234 Caenorhabditis elegans
Exon179636   182   V: 4733367-4733548 Caenorhabditis elegans
Exon179637   76   V: 4733598-4733673 Caenorhabditis elegans
Exon179638   955   V: 4733769-4734723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F39G3.3.1 4731911 4734723 1

1 Sequence

Length
2438

1 Sequence Ontology Term

Identifier Name Description
transcript