WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18G1.4a Sequence Name  C18G1.4a
Length (nt)  2082   Chromosome Location  V: 4756010-4756126
Chromosome . Primary Identifier  V Chromosome Location . Start  4756010
Chromosome Location . End  4756126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18G1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17420 PGL-3, isoform a 74.8 693 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00040971
WBRNAi00040972
WBRNAi00113912
WBRNAi00029093
WBRNAi00116327
WBRNAi00084336
WBRNAi00022644
WBRNAi00084328
WBRNAi00007817
WBRNAi00084343
WBRNAi00011019

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18G1.4a 4756010 4756126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003994 pgl-3 C18G1.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18G1.4a 4756010 4756126 1
CDS:C18G1.4a 4756173 4756319 1
CDS:C18G1.4a 4756365 4756723 1
CDS:C18G1.4a 4756771 4757111 1
CDS:C18G1.4a 4757158 4757300 1
CDS:C18G1.4a 4757351 4757522 1
CDS:C18G1.4a 4757566 4757948 1
CDS:C18G1.4a 4758000 4758419 1

1 Sequence

Length
2082

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18G1.4a.1 C18G1.4a.1 2272   V: 4755985-4758584