WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.5.1 Sequence Name  C37H5.5.1
Length (nt)  2427   Chromosome Location  V: 4827360-4836019
Chromosome . Primary Identifier  V Chromosome Location . Start  4827360
Chromosome Location . End  4836019 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016508 C37H5.5 C37H5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.5 C37H5.5 2337   V: 4827365-4827547

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.5.1 4827360 4836019 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179802   188   V: 4827360-4827547 Caenorhabditis elegans
Exon179803   136   V: 4827594-4827729 Caenorhabditis elegans
Exon179804   341   V: 4827781-4828121 Caenorhabditis elegans
Exon179805   262   V: 4828167-4828428 Caenorhabditis elegans
Exon179806   71   V: 4829373-4829443 Caenorhabditis elegans
Exon179807   939   V: 4829694-4830632 Caenorhabditis elegans
Exon179808   233   V: 4831784-4832016 Caenorhabditis elegans
Exon179821   257   V: 4835763-4836019 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.5.1 4827360 4836019 1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
transcript