WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.9c.2 Sequence Name  C37H5.9c.2
Length (nt)  1715   Chromosome Location  V: 4836027-4839983
Chromosome . Primary Identifier  V Chromosome Location . Start  4836027
Chromosome Location . End  4839983 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.9c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003528 nas-9 C37H5.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.9c C37H5.9c 1419   V: 4836037-4836408

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.9c.2 4836027 4839983 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179822   382   V: 4836027-4836408 Caenorhabditis elegans
Exon179828   87   V: 4837456-4837542 Caenorhabditis elegans
Exon179832   70   V: 4837726-4837795 Caenorhabditis elegans
Exon179836   130   V: 4837841-4837970 Caenorhabditis elegans
Exon179840   226   V: 4838027-4838252 Caenorhabditis elegans
Exon179844   126   V: 4838300-4838425 Caenorhabditis elegans
Exon179848   187   V: 4838587-4838773 Caenorhabditis elegans
Exon179852   182   V: 4839324-4839505 Caenorhabditis elegans
Exon179855   198   V: 4839601-4839798 Caenorhabditis elegans
Exon179859   127   V: 4839857-4839983 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.9c.2 4836027 4839983 -1

1 Sequence

Length
1715

1 Sequence Ontology Term

Identifier Name Description
transcript