WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.3b.1 Sequence Name  C37H5.3b.1
Length (nt)  1171   Chromosome Location  V: 4845116-4846954
Chromosome . Primary Identifier  V Chromosome Location . Start  4845116
Chromosome Location . End  4846954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016507 abhd-5.2 C37H5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.3b C37H5.3b 1080   V: 4845123-4845272

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.3b.1 4845116 4846954 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179872   157   V: 4845116-4845272 Caenorhabditis elegans
Exon179875   181   V: 4845324-4845504 Caenorhabditis elegans
Exon179877   324   V: 4846014-4846337 Caenorhabditis elegans
Exon179879   278   V: 4846399-4846676 Caenorhabditis elegans
Exon179880   231   V: 4846724-4846954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.3b.1 4845116 4846954 1

1 Sequence

Length
1171

1 Sequence Ontology Term

Identifier Name Description
transcript