WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C37H5.2.1 Sequence Name  C37H5.2.1
Length (nt)  1376   Chromosome Location  V: 4847653-4849838
Chromosome . Primary Identifier  V Chromosome Location . Start  4847653
Chromosome Location . End  4849838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C37H5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016506 abhd-5.1 C37H5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C37H5.2 C37H5.2 1068   V: 4847759-4847793

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.2.1 4847653 4849838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179882   141   V: 4847653-4847793 Caenorhabditis elegans
Exon179883   103   V: 4847925-4848027 Caenorhabditis elegans
Exon179884   181   V: 4848500-4848680 Caenorhabditis elegans
Exon179885   324   V: 4848744-4849067 Caenorhabditis elegans
Exon179886   163   V: 4849116-4849278 Caenorhabditis elegans
Exon179887   115   V: 4849327-4849441 Caenorhabditis elegans
Exon179888   349   V: 4849490-4849838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C37H5.2.1 4847653 4849838 1

1 Sequence

Length
1376

1 Sequence Ontology Term

Identifier Name Description
transcript