WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T19H12.6a.1 Sequence Name  T19H12.6a.1
Length (nt)  1914   Chromosome Location  V: 4874233-4877685
Chromosome . Primary Identifier  V Chromosome Location . Start  4874233
Chromosome Location . End  4877685 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T19H12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020590 T19H12.6 T19H12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T19H12.6a T19H12.6a 1764   V: 4874352-4874522

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T19H12.6a.1 4874233 4877685 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon179954   290   V: 4874233-4874522 Caenorhabditis elegans
Exon179956   154   V: 4875034-4875187 Caenorhabditis elegans
Exon179958   247   V: 4875240-4875486 Caenorhabditis elegans
Exon179960   533   V: 4875569-4876101 Caenorhabditis elegans
Exon179962   268   V: 4876448-4876715 Caenorhabditis elegans
Exon179964   311   V: 4876759-4877069 Caenorhabditis elegans
Exon179967   111   V: 4877575-4877685 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T19H12.6a.1 4874233 4877685 -1

1 Sequence

Length
1914

1 Sequence Ontology Term

Identifier Name Description
transcript