WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02E7.1a.1 Sequence Name  C02E7.1a.1
Length (nt)  3185   Chromosome Location  V: 4934706-4939085
Chromosome . Primary Identifier  V Chromosome Location . Start  4934706
Chromosome Location . End  4939085 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02E7.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015338 catp-2 C02E7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02E7.1a C02E7.1a 3153   V: 4934738-4934741

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02E7.1a.1 4934706 4939085 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180087   36   V: 4934706-4934741 Caenorhabditis elegans
Exon180088   100   V: 4934800-4934899 Caenorhabditis elegans
Exon180090   198   V: 4935662-4935859 Caenorhabditis elegans
Exon180092   69   V: 4935909-4935977 Caenorhabditis elegans
Exon180094   157   V: 4936026-4936182 Caenorhabditis elegans
Exon180096   168   V: 4936260-4936427 Caenorhabditis elegans
Exon180098   514   V: 4936477-4936990 Caenorhabditis elegans
Exon180101   166   V: 4937034-4937199 Caenorhabditis elegans
Exon180103   1663   V: 4937250-4938912 Caenorhabditis elegans
Exon180105   114   V: 4938972-4939085 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02E7.1a.1 4934706 4939085 1

1 Sequence

Length
3185

1 Sequence Ontology Term

Identifier Name Description
transcript